Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948079.1_cds_XP_016489454.1_79972

CDS Infomation

[gene=LOC107809361] [db_xref=GeneID:107809361] [protein=DExH-box ATP-dependent RNA helicase DExH15 chloroplastic isoform X2] [protein_id=XP_016489454.1] [location=join(7546..8010,8098..8273,8595..8708,9062..9170,9271..9357,12215..12333,12909..13056,13277..13876,13952..14230,14683..14889,15643..16005,16875..17111,18162..18382,18923..18932)] [gbkey=CDS]

Sequence

ATGAGCACACTCCCTATCCTCTTCTTCCCTTGGCCTTCACCTTCTCCTTTAAACTCCATA
ACCAGCCTCTCTCCATTTCTTCCACTTCTCCAAATCCAAACCCCAGGGTTCTGCTCCGTT
AACTCGATTCACACTCCGTACAGTTCTAAATCTAGAATCTTCTACAAATTTCCGAGGTCC
GTTTTTCCAACAGAGTCTCAAGACGAATACGAAGAAGAGGATGATGATGATGATGACGAA
GAAGCGGCGGAAGATTACGATAACGTCGTTTCGGCTGAGGTATCCGACGGAGGCGAAGAG
AGTGATGATGAACTTGAAAGTTCCCTTAGTGAAGTGTTGAACTTCGACGAAACGAGAAAG
CAGAGGGTCGAGAAGCTTCGGAATGAAGTTAGAGAGTTCGGTGATGAAATTATTGATGCT
AATGAACTTGCTTCTATTTACTCTTTTCGAATTGACAAATTTCAGCGATTGGCCATTCAA
GCTTTTTTGAGAGGTTCATCAGTTGTGGTATCTGCGCCTACAAGTAGCGGCAAAACTTTG
ATTGCTGAAGCTGCCGCTGTTGCTACAGTGGCAAAAGGAAGGAGACTATTCTATACTACT
CCTCTTAAGGCGTTATCCAATCAGAAATTTCGAGAATTTTGTGAAACGTTTGGTGAAAGT
AATGTGGGGCTCCTCACTGGAGATTCAGCTGTTAATAGAGATGCTCAGGTTTTAATTATG
ACAACTGAGATTTTGCGCAATATGCTATACCAGAGCATAGGGGTTGCTTCCTCAGATGGT
GGTCTTCTTCATGTTGATGTAATTGTTTTGGATGAAGTACACTATTTAAGTGACATATCT
CGGGGTACAGTTTGGGAAGAAATAGTTATATATTGCCCAAAGGAAGTTCAACTTATATGT
CTTTCGGCGACTGTAGCTAATCCAGATGAGTTGGCTGGATGGATAGGTCAGATTCATGGT
AGAACAGAGTTGGTAACATCATCCAAGCGTCCAGTTCCATTGACTTGGCACTTCGGCACA
AAGACAGCTTTAGTACCTCTTCTTGATGACAAAGGTACACGCATGAATAGGAAGCTGTCA
CTCAACTATTTACAGTATGATGAATCCGCCAGTGAGCTATACAAGGAAGAAGGATCTAAA
AGAAGAAAATCAAGAAAATGCGAAAATGATGTTCGTCCGCTTTCAAAGAATGATATAAAT
AATATTCGCCGCTCACAGGTACCTCAAATTATAGACACGTTGTGGCACCTAAAGGCGAGG
GATATGCTTCCAGCAGTTTGGTTCATTTTTAGCAGGAAAGGATGTGATGCAGCTGTTCAA
TATCTTGAAGACTGCAGGTTACTGGATGAGTGTGAAACGAGTGAAGTTGAGCTGGCACTC
AAGAGGTTCCGTATTCAATACCCTGATGCTGTGCGTGTGACTGCAGTGAAAGGCCTCCGC
CGAGGAGTGGCTGCACATCATGCTGGCTGTCTCCCCCTTTGGAAATCATTCATTGAAGAA
TTATTTCAGCGAGGTTTAGTTAAGGTTGTCTTTGCTACTGAAACACTTGCTGCTGGCATC
AATATGCCTGCTAGAACAGCTGTCATTTCATCTCTCAGCAAAAGGGGTGATAGTGGACGT
GTCCAGTTAAGCTCAAATGAGTTATTCCAAATGGCTGGGCGTGCTGGTCGTAGAGGTATT
GATGAAAAGGGTCATGTGGTTCTTGTTCAGACTCCGTATGAAGGGCCTGAAGAGTGCTGC
AAAGTTCTTTTTTCTGGGCTTCAGCCTCTTGTTTCACAATTTACTGCCTCGTATGGGATG
GTGCTTAATCTTCTTGCGGGGGCCAAAGTTACCCGTAGATCAAGTGAGTTAGATGAGATA
AAAGTCTCACGAGCAGGGCGGACTTTGGAAGAGGCAAGGAAGTTAATTGAGCAGAGTTTT
GGGAATTACGTGGGAAGCAATGTCATGTTTGCCGCAAAAGAGGAGCTTGCCAGAATAGAA
AAGGAAATAGAAACACTTACTTCAGAAATTAGCGAGGAAGCGATTGATAGAAAGAGCCAG
AAGCTCTTAGCGCAGTCAGCATATCAGGAGATTGCTGGACTCCAGGAAGAATTAAGAGCC
GAAAAGCGTCTTCGAACAGAACTGCGAAGAAAAATGGAGCTGGAAAGAGTGTTTTCGTTG
AAACCATTACTGAAGGAGCTAGAAGATGGACACCTTCCATTCATGTCTTTGCACTACAGC
GACAGTGACGGAGTACAACATTTAGTTGCTGCTGTTTATCTGGGGAAGGTTGATACTTTG
AATATTGAAAAGCTTAAAAGTATGGTGCGTGACTATGATGCCTTTGCATTAAAGACAGTA
GTGGAAAATTTTGAAGTTGGTGATAGTGGAGGAGAAGATGCTAAACCGTCTTATCACGTG
GCTCTTGGTTCAGATAACTCTTGGTATCTTTTCACAGAGAAGTGGATTAGAATGGTTTAC
AGAACAGGCTTTCCAAATGTTGCCTTAGCTCTTGGTGATGCTTTGCCTCGTGAAATTATG
ACTGAGCTTCTTGATAAGGCAGAGATGCAGTGGCAGAAGTTAGCTGTGTCTGAACTTGGA
GGTCTATGGTGTTTGGAAGGTTCCTTGGAGACATGGTCTTGGAGTTTAAATGTGCCAGTC
TTGAGCAGTCTATCTGAAGAGGATGAGGTCTTGCAATTGTCTAAAGCATACAATGATGCA
GTAGAATGTTACAAGAACCAACGTAATAAGGTCTCCCGTTTGAAGAAAAGGATAGCTCGT
ACAGAGGGCTTTAAAGAGTATAAGAAGATAATAGATTCAGCTAAGTTCACTGAGGAGAAG
ATTCGGCGGTTGAAGGTTAGGTCAAAGCGTTTGATTGGTCGTATAGAGCAGATTGAGCCG
ACTGGTTGGAAGGAATTTCTGCAGGTCAGCAATGTTATACATGAAAGTAGAGCATTGGAT
ATCAATACACATGTCATTTTCCCCCTGGGTGAAACTGCAGCTGCAATTAGAGGAGAAAAT
GAACTTTGGCTTGCGACGGTTCTTCGAAATAAATTGTTGCTGGACCTAAAACCTGCACAG
CTTGCTGCAGTCTGTGGAAGTCTAGTTTCTGAAGGAATTAGACTTCGGCCCTGGAAAAAC
AACAGAGACTGCTGA

Peptide Sequence

PEP ID

XP_016489454.1

PEP Infomation

PREDICTED: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic isoform X2 [Nicotiana tabacum]

Sequence

MSTLPILFFPWPSPSPLNSITSLSPFLPLLQIQTPGFCSVNSIHTPYSSKSRIFYKFPRS
VFPTESQDEYEEEDDDDDDEEAAEDYDNVVSAEVSDGGEESDDELESSLSEVLNFDETRK
QRVEKLRNEVREFGDEIIDANELASIYSFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTL
IAEAAAVATVAKGRRLFYTTPLKALSNQKFREFCETFGESNVGLLTGDSAVNRDAQVLIM
TTEILRNMLYQSIGVASSDGGLLHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLIC
LSATVANPDELAGWIGQIHGRTELVTSSKRPVPLTWHFGTKTALVPLLDDKGTRMNRKLS
LNYLQYDESASELYKEEGSKRRKSRKCENDVRPLSKNDINNIRRSQVPQIIDTLWHLKAR
DMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELALKRFRIQYPDAVRVTAVKGLR
RGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDSGR
VQLSSNELFQMAGRAGRRGIDEKGHVVLVQTPYEGPEECCKVLFSGLQPLVSQFTASYGM
VLNLLAGAKVTRRSSELDEIKVSRAGRTLEEARKLIEQSFGNYVGSNVMFAAKEELARIE
KEIETLTSEISEEAIDRKSQKLLAQSAYQEIAGLQEELRAEKRLRTELRRKMELERVFSL
KPLLKELEDGHLPFMSLHYSDSDGVQHLVAAVYLGKVDTLNIEKLKSMVRDYDAFALKTV
VENFEVGDSGGEDAKPSYHVALGSDNSWYLFTEKWIRMVYRTGFPNVALALGDALPREIM
TELLDKAEMQWQKLAVSELGGLWCLEGSLETWSWSLNVPVLSSLSEEDEVLQLSKAYNDA
VECYKNQRNKVSRLKKRIARTEGFKEYKKIIDSAKFTEEKIRRLKVRSKRLIGRIEQIEP
TGWKEFLQVSNVIHESRALDINTHVIFPLGETAAAIRGENELWLATVLRNKLLLDLKPAQ
LAAVCGSLVSEGIRLRPWKNNRDC

Transcript Sequence

Gene sequence data has not been registered.